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学生对 Technical University of Denmark (DTU) 提供的 Whole genome sequencing of bacterial genomes - tools and applications 的评价和反馈

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课程概述

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

热门审阅

MB

Jun 9, 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

AP

Jul 19, 2020

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

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276 - Whole genome sequencing of bacterial genomes - tools and applications 的 300 个评论（共 419 个）

创建者 MEER K H S

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Oct 28, 2024

Enjoyed the course

创建者 rhudith c

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Sep 25, 2022

very informative!

创建者 Reghan M

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Sep 1, 2021

Its a great course

创建者 Revathy B

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May 25, 2020

really informative

创建者 Hajar F A

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Apr 23, 2020

Really appreciate!

创建者 FABRÍCIO M C

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Mar 13, 2024

ótimo e funcional

创建者 Dr A V

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Jul 15, 2021

good intellectual

创建者 Sakira N A

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Jul 8, 2023

Great Experience

创建者 Ackshaya M S

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Jan 21, 2022

very nice course

创建者 Md A

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Jul 3, 2021

Excellent course

创建者 Shanmukha A P

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Jun 8, 2020

Excellent course

创建者 Abdul F S

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Mar 12, 2025

it was amazing

创建者 Md. R K

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May 19, 2023

Great course .

创建者 davis e

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May 23, 2022

amazing course

创建者 Khder Y

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Nov 23, 2021

Thank you alot

创建者 Christian A

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Jun 6, 2020

Easy to follow

创建者 Bertram K

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Aug 2, 2020

Great Course!

创建者 Frank B

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Oct 4, 2023

I enjoyed it

创建者 Joy A

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Feb 7, 2023

Great course

创建者 Vitasta J

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Jun 30, 2022

Informative.

创建者 Mehdi G

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Feb 26, 2022

Constructive

创建者 A A A E

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Jan 8, 2019

applications

创建者 Shuva r S

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Apr 9, 2018

Learnt a lot

创建者 MS. V T U

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Jun 17, 2025

good course

创建者 Ameerhamza g

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Jan 22, 2024

Best course